Remember all that stuff I did last weekend - forget it and lets start again.
I learned that the Rapier gearbox wasn't the simple swap I'd hoped for so rather than fiddle about modifying bell housing and linkages I'd make a Rapier/Commer hybrid box[}

] This meant stripping both boxes down to swap the input shaft to enable the Commer bell housing to be used - this way everything would line up and no mods required to anything else. I made some dummy selector shafts and one for the layshaft - I actually read the manual [^] and proceeded to take things apart
It was lucky I stripped the Rapier box because this is what fell out with the needle rollers [:0]
The brass ring should be in one piece like the one on the end of the Commer shaft.
The two shafts compared this extra length is why the linkage needs to be modified if you keep the Rapier set up.
Unexploded needle rollers held in with grease and ready to go back on.
Wont need the Holbay release bearing arm I bought now [V]
Back on at last. Linkage fitted back on a treat.

Just got to make a mounting cross member and shorten the prop and job done [^]
Edit a long time later:
Don't do it this way as the Commer 1st gear wheel doesn't mesh properly with the Rapier box. You need to fit the Rapier 1st gear wheel to the Commer input shaft. I learned the hard way - see later posts on gearbox re-build
'Harvey the RV'